IL_4V8C_310
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GACAAC*GCUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 4V8C|1|DA|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8C_310 not in the Motif Atlas
- Homologous match to IL_4LFB_009
- Geometric discrepancy: 0.1016
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V8C|1|DA|G|148
4V8C|1|DA|A|149
4V8C|1|DA|C|150
4V8C|1|DA|A|151
4V8C|1|DA|A|152
4V8C|1|DA|C|153
*
4V8C|1|DA|G|168
4V8C|1|DA|C|169
4V8C|1|DA|U|170
4V8C|1|DA|A|171
4V8C|1|DA|A|172
4V8C|1|DA|U|173
4V8C|1|DA|C|174
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain DW
- 30S RIBOSOMAL PROTEIN S20
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