IL_4V8E_032

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCUAGG*CCAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8E|1|AA|G|875
4V8E|1|AA|C|876
4V8E|1|AA|U|877
4V8E|1|AA|A|878
4V8E|1|AA|G|879
4V8E|1|AA|G|880
*
4V8E|1|AA|C|897
4V8E|1|AA|C|898
4V8E|1|AA|A|899
4V8E|1|AA|A|900
4V8E|1|AA|A|901
4V8E|1|AA|C|902

Current chains

Chain AA

RNA (2912-MER)

Nearby chains

Chain AP

50S ribosomal protein L16

Chain AV

50S ribosomal protein L25

Chain BB

TRNA-TYR