IL_4V8E_251

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAA*UCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8E_251 not in the Motif Atlas

Homologous match to IL_7RQB_065

Geometric discrepancy: 0.0748

The information below is about IL_7RQB_065

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

4V8E|1|CA|C|1711
4V8E|1|CA|A|1712
4V8E|1|CA|A|1713
*
4V8E|1|CA|U|2018
4V8E|1|CA|C|2019
4V8E|1|CA|G|2020

Current chains

Chain CA

RNA (2912-MER)

Nearby chains

Chain CE

50S ribosomal protein L3

Chain CN

50S ribosomal protein L14

Chain CR

50S ribosomal protein L19