IL_4V8E_301
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAACC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8E_301 not in the Motif Atlas
- Homologous match to IL_7RQB_112
- Geometric discrepancy: 0.1404
- The information below is about IL_7RQB_112
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V8E|1|CB|G|25
4V8E|1|CB|G|26
4V8E|1|CB|A|27
4V8E|1|CB|A|28
4V8E|1|CB|C|29
4V8E|1|CB|C|30
*
4V8E|1|CB|G|58
4V8E|1|CB|A|59
4V8E|1|CB|A|60
4V8E|1|CB|A|61
4V8E|1|CB|C|62
Current chains
- Chain CB
- 5S RIBOSOMAL RNA
Nearby chains
- Chain CG
- 50S ribosomal protein L5
- Chain CQ
- 50S ribosomal protein L18
Coloring options: