IL_4V8E_323

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGGAAGAAG*UGUAAACU

Length

17 nucleotides

Bulged bases

4V8E|1|DA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8E|1|DA|A|408
4V8E|1|DA|G|409
4V8E|1|DA|G|410
4V8E|1|DA|A|411
4V8E|1|DA|A|412
4V8E|1|DA|G|413
4V8E|1|DA|A|414
4V8E|1|DA|A|415
4V8E|1|DA|G|416
*
4V8E|1|DA|U|427
4V8E|1|DA|G|428
4V8E|1|DA|U|429
4V8E|1|DA|A|430
4V8E|1|DA|A|431
4V8E|1|DA|A|432
4V8E|1|DA|C|433
4V8E|1|DA|U|434

Current chains

Chain DA

16S ribosomal RNA

Nearby chains

Chain DG

30S RIBOSOMAL PROTEIN S4

Chain DO

30S RIBOSOMAL PROTEIN S12