IL_4V8G_150

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

4V8G|1|BA|G|2112, 4V8G|1|BA|G|2116

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8G_150 not in the Motif Atlas

Geometric match to IL_1MZP_002

Geometric discrepancy: 0.3227

The information below is about IL_1MZP_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

4V8G|1|BA|G|2110
4V8G|1|BA|C|2111
4V8G|1|BA|G|2112
4V8G|1|BA|U|2113
4V8G|1|BA|A|2114
4V8G|1|BA|G|2115
4V8G|1|BA|G|2116
4V8G|1|BA|A|2117
4V8G|1|BA|U|2118
4V8G|1|BA|A|2119
4V8G|1|BA|G|2120
*
4V8G|1|BA|C|2178
4V8G|1|BA|C|2179

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains