IL_4V8G_375

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUC*GAUAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8G_375 not in the Motif Atlas

Homologous match to IL_6CZR_361

Geometric discrepancy: 0.1466

The information below is about IL_6CZR_361

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_56539.1

Basepair signature

cWW-cWW-cSH-cWW-L

Number of instances in this motif group

4

Unit IDs

4V8G|1|CA|G|597
4V8G|1|CA|U|598
4V8G|1|CA|C|599
*
4V8G|1|CA|G|639
4V8G|1|CA|A|640
4V8G|1|CA|U|641
4V8G|1|CA|A|642
4V8G|1|CA|C|643

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CH

30S Ribosomal Protein S8

Chain CQ

30S Ribosomal Protein S17