IL_4V8H_327
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUG*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GUG,CAC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_327 not in the Motif Atlas
- Geometric match to IL_3LA5_001
- Geometric discrepancy: 0.231
- The information below is about IL_3LA5_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4V8H|1|DA|G|2121
4V8H|1|DA|U|2122
4V8H|1|DA|G|2123
*
4V8H|1|DA|C|2175
4V8H|1|DA|A|2176
4V8H|1|DA|C|2177
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: