3D structure

PDB id
4V8J (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G347U.
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GUUUCC*GGUAGC
Length
12 nucleotides
Bulged bases
4V8J|1|BA|U|2689, 4V8J|1|BA|C|2690
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V8J|1|BA|G|2686
4V8J|1|BA|U|2687
4V8J|1|BA|U|2688
4V8J|1|BA|U|2689
4V8J|1|BA|C|2690
4V8J|1|BA|C|2691
*
4V8J|1|BA|G|2718
4V8J|1|BA|G|2719
4V8J|1|BA|U|2720
4V8J|1|BA|A|2721
4V8J|1|BA|G|2722
4V8J|1|BA|C|2723

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BE
50S ribosomal protein L3
Chain BO
50S ribosomal protein L14
Chain BR
50S ribosomal protein L17
Chain BT
50S ribosomal protein L19

Coloring options:

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