IL_4V8J_386

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

AGGGAAC*GGUGCCCCGCGAGGGGAGCCCU

Length

29 nucleotides

Bulged bases

4V8J|1|AA|G|979, 4V8J|1|AA|A|983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8J|1|AA|A|978
4V8J|1|AA|G|979
4V8J|1|AA|G|980
4V8J|1|AA|G|981
4V8J|1|AA|A|982
4V8J|1|AA|A|983
4V8J|1|AA|C|984
*
4V8J|1|AA|G|1001
4V8J|1|AA|G|1002
4V8J|1|AA|U|1003
4V8J|1|AA|G|1004
4V8J|1|AA|C|1005
4V8J|1|AA|C|1006
4V8J|1|AA|C|1007
4V8J|1|AA|C|1008
4V8J|1|AA|G|1009
4V8J|1|AA|C|1010
4V8J|1|AA|G|1011
4V8J|1|AA|A|1012
4V8J|1|AA|G|1013
4V8J|1|AA|G|1014
4V8J|1|AA|G|1015
4V8J|1|AA|G|1016
4V8J|1|AA|A|1017
4V8J|1|AA|G|1018
4V8J|1|AA|C|1019
4V8J|1|AA|C|1020
4V8J|1|AA|C|1021
4V8J|1|AA|U|1022

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain CG

30S ribosomal protein S7

Chain DA

Large subunit ribosomal RNA; LSU rRNA