IL_4V8P_454

3D structure

PDB id

4V8P (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UGAAA*UGUAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8P|1|H1|U|167
4V8P|1|H1|G|168
4V8P|1|H1|A|169
4V8P|1|H1|A|170
4V8P|1|H1|A|171
*
4V8P|1|H1|U|248
4V8P|1|H1|G|249
4V8P|1|H1|U|250
4V8P|1|H1|A|251
4V8P|1|H1|A|252

Current chains

Chain H1

26S RRNA

Nearby chains

Chain GU

RPL35

Chain HU

RPL13