IL_4V8P_523

3D structure

PDB id

4V8P (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CUAUG*UGUAUG

Length

11 nucleotides

Bulged bases

4V8P|1|H1|U|1729, 4V8P|1|H1|U|1767

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8P|1|H1|C|1726
4V8P|1|H1|U|1727
4V8P|1|H1|A|1728
4V8P|1|H1|U|1729
4V8P|1|H1|G|1730
*
4V8P|1|H1|U|1763
4V8P|1|H1|G|1764
4V8P|1|H1|U|1765
4V8P|1|H1|A|1766
4V8P|1|H1|U|1767
4V8P|1|H1|G|1768

Current chains

Chain H1

26S RRNA

Nearby chains

Chain HL

RPL34