IL_4V8P_603

3D structure

PDB id

4V8P (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GAGCAA*UGGC

Length

10 nucleotides

Bulged bases

4V8P|1|H1|C|433, 4V8P|1|H1|A|434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8P|1|H1|G|430
4V8P|1|H1|A|431
4V8P|1|H1|G|432
4V8P|1|H1|C|433
4V8P|1|H1|A|434
4V8P|1|H1|A|435
*
4V8P|1|H1|U|647
4V8P|1|H1|G|648
4V8P|1|H1|G|649
4V8P|1|H1|C|650

Current chains

Chain H1

26S RRNA

Nearby chains

Chain GX

60S RIBOSOMAL PROTEIN L32

Chain HH

RPL35A