IL_4V8T_052
3D structure
- PDB id
- 4V8T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8T_052 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.0534
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
4V8T|1|5|U|1123
4V8T|1|5|U|1124
4V8T|1|5|U|1125
*
4V8T|1|5|A|1133
4V8T|1|5|G|1134
4V8T|1|5|A|1135
Current chains
- Chain 5
- 25S RIBOSOMAL RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain I
- 60S RIBOSOMAL PROTEIN L10
- Chain T
- 60S RIBOSOMAL PROTEIN L21-A
- Chain b
- 60S RIBOSOMAL PROTEIN L29
Coloring options: