IL_4V8U_076

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUAG*CGAAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8U_076 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.5905

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05192.8

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4V8U|1|BA|C|292
4V8U|1|BA|U|293
4V8U|1|BA|A|294
4V8U|1|BA|G|295
*
4V8U|1|BA|C|343
4V8U|1|BA|G|344
4V8U|1|BA|A|345
4V8U|1|BA|A|346
4V8U|1|BA|A|347
4V8U|1|BA|G|348

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S RIBOSOMAL PROTEIN L24