IL_4V8U_425

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8U_425 not in the Motif Atlas

Homologous match to IL_9DFE_011

Geometric discrepancy: 0.1797

The information below is about IL_9DFE_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

4V8U|1|DA|U|293
4V8U|1|DA|A|294
4V8U|1|DA|G|295
*
4V8U|1|DA|C|343
4V8U|1|DA|G|344
4V8U|1|DA|A|345
4V8U|1|DA|A|346
4V8U|1|DA|A|347

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain DY

50S RIBOSOMAL PROTEIN L24