IL_4V8X_392
3D structure
- PDB id
- 4V8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Thermus thermophilus ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GGG*UACC
- Length
- 7 nucleotides
- Bulged bases
- 4V8X|1|DA|A|363|||F
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8X_392 not in the Motif Atlas
- Geometric match to IL_5B2P_002
- Geometric discrepancy: 0.323
- The information below is about IL_5B2P_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V8X|1|DA|G|272|||C
4V8X|1|DA|G|272|||D
4V8X|1|DA|G|272|||E
*
4V8X|1|DA|U|363|||E
4V8X|1|DA|A|363|||F
4V8X|1|DA|C|364
4V8X|1|DA|C|365
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DI
- 50S RIBOSOMAL PROTEIN L9
Coloring options: