IL_4V8Z_109

3D structure

PDB id

4V8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.6 Å

Loop

Sequence

AGACAUGGCUGGG*CAUAAU

Length

19 nucleotides

Bulged bases

4V8Z|1|B5|U|620

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8Z|1|B5|A|436
4V8Z|1|B5|G|437
4V8Z|1|B5|A|438
4V8Z|1|B5|C|439
4V8Z|1|B5|A|440
4V8Z|1|B5|U|441
4V8Z|1|B5|G|442
4V8Z|1|B5|G|443
4V8Z|1|B5|C|491
4V8Z|1|B5|U|492
4V8Z|1|B5|G|493
4V8Z|1|B5|G|494
4V8Z|1|B5|G|495
*
4V8Z|1|B5|C|618
4V8Z|1|B5|A|619
4V8Z|1|B5|U|620
4V8Z|1|B5|A|621
4V8Z|1|B5|A|622
4V8Z|1|B5|U|623

Current chains

Chain B5

25S RIBOSOMAL RNA

Nearby chains

Chain BE

60S RIBOSOMAL PROTEIN L6-A

Chain Be

60S RIBOSOMAL PROTEIN L32

Chain Bf

60S RIBOSOMAL PROTEIN L33-A