IL_4V90_058
3D structure
- PDB id
- 4V90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V90_058 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.1489
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V90|1|AA|G|1401
4V90|1|AA|C|1402
4V90|1|AA|C|1403
4V90|1|AA|C|1404
*
4V90|1|AA|G|1497
4V90|1|AA|U|1498
4V90|1|AA|A|1499
4V90|1|AA|A|1500
4V90|1|AA|C|1501
Current chains
- Chain AA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain AX
- 5'-R(*UP*AP*AP*AP*AP*AP*UP*GP*UP)-3'
- Chain AY
- ELONGATION FACTOR G
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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