#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 91-92-33-84-75-6
1 IL_6CZR_3686CZR0.104801a SSU rRNAG1475UR31476A1477A1478C1479*G13844OC1385C13865MC1387cWWncSHcWScWWcWW
2 IL_5J7L_0595J7L0.00000AA SSU rRNAG1497UR31498A1499A1500C1501*G14014OC1402C1403C1404cWWcSHcWScWWcWW
3 IL_4V88_4644V880.08690A6 SSU rRNAG1760U1761A1762A1763C1764*G1638C1639C1640C1641cWWcSHcWScWWcWW
4 IL_8C3A_4718C3A0.09390CM SSU rRNAG1747U1748A1749A1750C1751*G1625C1626C1627C1628cWWcSHcWScWWcWW
5 IL_4LFB_0684LFB0.10490A SSU rRNAG1497UR31498A1499A1500C1501*G14014OC1402C14035MC1404cWWcSHcWScWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
G(UR3)AAC*G(4OC)C(5MC)2
GUAAC*GCCC2
G(UR3)AAC*G(4OC)CC1
Non-Watson-Crick part of the motif
SequenceCounts
(UR3)AA*(4OC)C3
UAA*CC2

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-cSH-cWS-cWW-cWW
    Heat map statistics
    Min 0.09 | Avg 0.09 | Max 0.16
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.9042 s