IL_4V91_006

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUAGUAA*UGAAGCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35536.1

Basepair signature

cWW-tSH-tSW-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

4V91|1|1|C|82
4V91|1|1|U|83
4V91|1|1|U|84
4V91|1|1|A|85
4V91|1|1|G|86
4V91|1|1|U|87
4V91|1|1|A|88
4V91|1|1|A|89
*
4V91|1|1|U|97
4V91|1|1|G|98
4V91|1|1|A|99
4V91|1|1|A|100
4V91|1|1|G|101
4V91|1|1|C|102
4V91|1|1|G|103

Current chains

Chain 1

25S RRNA

Nearby chains

Chain L

EL13

Chain N

EL15

Chain Q

EL18

Chain a

UL15