IL_4V91_032

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

4V91|1|1|A|933, 4V91|1|1|G|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28684.1

Basepair signature

cWW-R-tHW-tHW-tWW-cWW

Number of instances in this motif group

12

Unit IDs

4V91|1|1|G|805
4V91|1|1|A|806
4V91|1|1|A|807
4V91|1|1|A|808
4V91|1|1|G|809
*
4V91|1|1|C|931
4V91|1|1|U|932
4V91|1|1|A|933
4V91|1|1|G|934
4V91|1|1|U|935
4V91|1|1|A|936
4V91|1|1|G|937
4V91|1|1|C|938

Current chains

Chain 1

25S RRNA

Nearby chains

Chain C

UL4

Chain L

EL13

Chain N

EL15

Chain a

UL15

Chain j

EL37