IL_4V91_041

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGU*AU

Length

5 nucleotides

Bulged bases

4V91|1|1|G|984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V91_041 not in the Motif Atlas

Homologous match to IL_8C3A_040

Geometric discrepancy: 0.1651

The information below is about IL_8C3A_040

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4V91|1|1|A|983
4V91|1|1|G|984
4V91|1|1|U|985
*
4V91|1|1|A|1099
4V91|1|1|U|1100

Current chains

Chain 1

25S RRNA

Nearby chains

Chain F

UL30

Chain T

EL21

Chain b

EL29