IL_4V91_044

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCGAAU*AAAC

Length

10 nucleotides

Bulged bases

4V91|1|1|G|1001

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42675.1

Basepair signature

cWW-tWH-cSH-L-cWS-cWW

Number of instances in this motif group

38

Unit IDs

4V91|1|1|G|999
4V91|1|1|C|1000
4V91|1|1|G|1001
4V91|1|1|A|1002
4V91|1|1|A|1003
4V91|1|1|U|1004
*
4V91|1|1|A|1046
4V91|1|1|A|1047
4V91|1|1|A|1048
4V91|1|1|C|1049

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain D

UL18

Chain I

UL16

Chain T

EL21