IL_4V91_052

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V91_052 not in the Motif Atlas

Homologous match to IL_8C3A_050

Geometric discrepancy: 0.0832

The information below is about IL_8C3A_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4V91|1|1|U|1123
4V91|1|1|U|1124
4V91|1|1|U|1125
*
4V91|1|1|A|1133
4V91|1|1|G|1134
4V91|1|1|A|1135

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain I

UL16

Chain T

EL21

Chain b

EL29