IL_4V91_056

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUCAUCAG*CUCAAG

Length

14 nucleotides

Bulged bases

4V91|1|1|U|1191, 4V91|1|1|C|1192, 4V91|1|1|C|1316, 4V91|1|1|A|1318

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19883.1

Basepair signature

cWW-tWW-L-tWW-tWH-cWW

Number of instances in this motif group

5

Unit IDs

4V91|1|1|C|1187
4V91|1|1|U|1188
4V91|1|1|C|1189
4V91|1|1|A|1190
4V91|1|1|U|1191
4V91|1|1|C|1192
4V91|1|1|A|1193
4V91|1|1|G|1194
*
4V91|1|1|C|1314
4V91|1|1|U|1315
4V91|1|1|C|1316
4V91|1|1|A|1317
4V91|1|1|A|1318
4V91|1|1|G|1319

Current chains

Chain 1

25S RRNA

Nearby chains

Chain H

UL6

Chain M

EL14

Chain O

UL13

Chain S

EL20

Chain m

EL40