IL_4V91_067

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAGUAG*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29698.1

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

21

Unit IDs

4V91|1|1|G|1444
4V91|1|1|U|1445
4V91|1|1|A|1446
4V91|1|1|G|1447
4V91|1|1|U|1448
4V91|1|1|A|1449
4V91|1|1|G|1450
*
4V91|1|1|C|2354
4V91|1|1|G|2355
4V91|1|1|A|2356
4V91|1|1|A|2357
4V91|1|1|A|2358
4V91|1|1|C|2359

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain C

UL4

Chain P

UL22