IL_4V91_071

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAUUCUUC*GGAAUAGUUUUC

Length

21 nucleotides

Bulged bases

4V91|1|1|U|1629, 4V91|1|1|U|1820, 4V91|1|1|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84828.1

Basepair signature

cWW-L-R-R-R-L-L-cWW-L-R-R-R-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4V91|1|1|G|1623
4V91|1|1|G|1624
4V91|1|1|A|1625
4V91|1|1|U|1626
4V91|1|1|U|1627
4V91|1|1|C|1628
4V91|1|1|U|1629
4V91|1|1|U|1630
4V91|1|1|C|1631
*
4V91|1|1|G|1811
4V91|1|1|G|1812
4V91|1|1|A|1813
4V91|1|1|A|1814
4V91|1|1|U|1815
4V91|1|1|A|1816
4V91|1|1|G|1817
4V91|1|1|U|1818
4V91|1|1|U|1819
4V91|1|1|U|1820
4V91|1|1|U|1821
4V91|1|1|C|1822

Current chains

Chain 1

25S RRNA

Nearby chains

Chain Z

EL27

Chain g

EL34

Chain k

EL38