IL_4V91_072

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAAU*AGGAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35765.1

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

58

Unit IDs

4V91|1|1|U|1645
4V91|1|1|G|1646
4V91|1|1|A|1647
4V91|1|1|A|1648
4V91|1|1|U|1649
*
4V91|1|1|A|1806
4V91|1|1|G|1807
4V91|1|1|G|1808
4V91|1|1|A|1809
4V91|1|1|A|1810

Current chains

Chain 1

25S RRNA

Nearby chains

Chain A

UL2

Chain Z

EL27

Chain g

EL34