IL_4V91_079

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGAAUU*GGAGAUG

Length

14 nucleotides

Bulged bases

4V91|1|1|U|1716, 4V91|1|1|A|1729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_17283.1

Basepair signature

cWW-tSH-tSH-tHS-tSS-L-R-cWW

Number of instances in this motif group

6

Unit IDs

4V91|1|1|C|1711
4V91|1|1|G|1712
4V91|1|1|G|1713
4V91|1|1|A|1714
4V91|1|1|A|1715
4V91|1|1|U|1716
4V91|1|1|U|1717
*
4V91|1|1|G|1727
4V91|1|1|G|1728
4V91|1|1|A|1729
4V91|1|1|G|1730
4V91|1|1|A|1731
4V91|1|1|U|1732
4V91|1|1|G|1733

Current chains

Chain 1

25S RRNA

Nearby chains

Chain R

EL19

Chain Z

EL27

Chain c

EL30

Chain g

EL34

Chain p

EL43