IL_4V91_095

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCAAAGU*AACCAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57391.1

Basepair signature

cWW-cWW-L-R-R-R-L-L-tHS-cWW

Number of instances in this motif group

9

Unit IDs

4V91|1|1|U|2211
4V91|1|1|C|2212
4V91|1|1|A|2213
4V91|1|1|A|2214
4V91|1|1|A|2215
4V91|1|1|G|2216
4V91|1|1|U|2217
*
4V91|1|1|A|2228
4V91|1|1|A|2229
4V91|1|1|C|2230
4V91|1|1|C|2231
4V91|1|1|A|2232
4V91|1|1|A|2233
4V91|1|1|G|2234

Current chains

Chain 1

25S RRNA

Nearby chains

Chain i

EL36

Chain o

EL42