IL_4V91_097

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

4V91|1|1|A|2281, 4V91|1|1|C|2287, 4V91|1|1|C|2306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62969.1

Basepair signature

cWW-L-R-cHW-L-L-L-L-L-cWW

Number of instances in this motif group

9

Unit IDs

4V91|1|1|C|2277
4V91|1|1|C|2278
4V91|1|1|A|2279
4V91|1|1|A|2280
4V91|1|1|A|2281
4V91|1|1|U|2282
4V91|1|1|G|2283
4V91|1|1|C|2284
4V91|1|1|C|2285
4V91|1|1|U|2286
4V91|1|1|C|2287
4V91|1|1|G|2288
*
4V91|1|1|C|2304
4V91|1|1|G|2305
4V91|1|1|C|2306
4V91|1|1|G|2307

Current chains

Chain 1

25S RRNA

Nearby chains

Chain n

EL41