3D structure

PDB id
4V91 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GCGG*UAC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_30484.1
Basepair signature
cWW-cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

4V91|1|1|G|2391
4V91|1|1|C|2392
4V91|1|1|G|2393
4V91|1|1|G|2394
*
4V91|1|1|U|2986
4V91|1|1|A|2987
4V91|1|1|C|2988

Current chains

Chain 1
25S RRNA

Nearby chains

Chain B
UL3
Chain O
UL13

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2442 s