IL_4V91_106

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUGAAGC*GGGU

Length

11 nucleotides

Bulged bases

4V91|1|1|G|2522, 4V91|1|1|G|2585, 4V91|1|1|G|2586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97868.1

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

5

Unit IDs

4V91|1|1|A|2520
4V91|1|1|U|2521
4V91|1|1|G|2522
4V91|1|1|A|2523
4V91|1|1|A|2524
4V91|1|1|G|2525
4V91|1|1|C|2526
*
4V91|1|1|G|2584
4V91|1|1|G|2585
4V91|1|1|G|2586
4V91|1|1|U|2587

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain A

UL2

Chain G

EL8

Chain X

UL23