IL_4V91_128

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUUUG*CGAAG

Length

11 nucleotides

Bulged bases

4V91|1|1|U|3056, 4V91|1|1|U|3058

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81806.1

Basepair signature

cWW-R-tWH-tWS-cWW

Number of instances in this motif group

2

Unit IDs

4V91|1|1|U|3054
4V91|1|1|U|3055
4V91|1|1|U|3056
4V91|1|1|U|3057
4V91|1|1|U|3058
4V91|1|1|G|3059
*
4V91|1|1|C|3084
4V91|1|1|G|3085
4V91|1|1|A|3086
4V91|1|1|A|3087
4V91|1|1|G|3088

Current chains

Chain 1

25S RRNA

Nearby chains

Chain B

UL3

Chain W

EL24

Chain d

EL31