3D structure

PDB id
4V91 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UGUAAG*CUGAG
Length
11 nucleotides
Bulged bases
4V91|1|1|G|3369
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_80466.1
Basepair signature
cWW-tSH-L-L-tHH-cWW
Number of instances in this motif group
2

Unit IDs

4V91|1|1|U|3332
4V91|1|1|G|3333
4V91|1|1|U|3334
4V91|1|1|A|3335
4V91|1|1|A|3336
4V91|1|1|G|3337
*
4V91|1|1|C|3367
4V91|1|1|U|3368
4V91|1|1|G|3369
4V91|1|1|A|3370
4V91|1|1|G|3371

Current chains

Chain 1
25S RRNA

Nearby chains

Chain B
UL3
Chain W
EL24

Coloring options:

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