IL_4V91_150
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAAAGCA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V91_150 not in the Motif Atlas
- Homologous match to IL_5TBW_373
- Geometric discrepancy: 0.1203
- The information below is about IL_5TBW_373
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- No text annotation
- Motif group
- IL_10207.3
- Basepair signature
- cWW-cWW-L-cSW-L-R-L-cWW-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V91|1|3|G|21
4V91|1|3|A|22
4V91|1|3|A|23
4V91|1|3|A|24
4V91|1|3|G|25
4V91|1|3|C|26
4V91|1|3|A|27
*
4V91|1|3|U|53
4V91|1|3|U|54
4V91|1|3|A|55
4V91|1|3|A|56
4V91|1|3|G|57
4V91|1|3|C|58
Current chains
- Chain 3
- 5S RRNA
Nearby chains
- Chain D
- UL18
- Chain J
- UL5
Coloring options: