IL_4V92_027

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACA*UGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: ACA,UGU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V92_027 not in the Motif Atlas

Geometric match to IL_3ICQ_003

Geometric discrepancy: 0.2632

The information below is about IL_3ICQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

4V92|1|A2|A|483
4V92|1|A2|C|484
4V92|1|A2|A|485
*
4V92|1|A2|U|502
4V92|1|A2|G|503
4V92|1|A2|U|504

Current chains

Chain A2

18S RRNA

Nearby chains

Chain Be

ES30