IL_4V92_127

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUCGA*UG

Length

8 nucleotides

Bulged bases

4V92|1|A2|G|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V92_127 not in the Motif Atlas

Homologous match to IL_8CRE_409

Geometric discrepancy: 0.3592

The information below is about IL_8CRE_409

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01372.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4V92|1|A2|U|318
4V92|1|A2|U|319
4V92|1|A2|U|320
4V92|1|A2|C|321
4V92|1|A2|G|322
4V92|1|A2|A|323
*
4V92|1|A2|U|345
4V92|1|A2|G|346

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BI

ES8

Chain BL

US17