IL_4V95_190

3D structure

PDB id

4V95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of YAEJ bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCC*GGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V95_190 not in the Motif Atlas

Geometric match to IL_4KR9_002

Geometric discrepancy: 0.1934

The information below is about IL_4KR9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V95|1|CA|G|416
4V95|1|CA|C|417
4V95|1|CA|C|418
*
4V95|1|CA|G|425
4V95|1|CA|G|426
4V95|1|CA|U|427

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CD

30S Ribosomal Protein S4