IL_4V95_358
3D structure
- PDB id
- 4V95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of YAEJ bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UCCC*GGG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V95_358 not in the Motif Atlas
- Geometric match to IL_5B2P_002
- Geometric discrepancy: 0.3354
- The information below is about IL_5B2P_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V95|1|DA|U|2401
4V95|1|DA|C|2402
4V95|1|DA|C|2403
4V95|1|DA|C|2404
*
4V95|1|DA|G|2413
4V95|1|DA|G|2414
4V95|1|DA|G|2415
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain D1
- 50S Ribosomal Protein L28
- Chain D6
- 50S Ribosomal Protein L33
- Chain D8
- 50S Ribosomal Protein L35
- Chain DP
- 50S Ribosomal Protein L15
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