3D structure

PDB id
4V97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G299A.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
ACGA*UCUAU
Length
9 nucleotides
Bulged bases
4V97|1|BA|C|2055
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V97_138 not in the Motif Atlas
Homologous match to IL_7RQB_079
Geometric discrepancy: 0.1336
The information below is about IL_7RQB_079
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_01206.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
2

Unit IDs

4V97|1|BA|A|2054
4V97|1|BA|C|2055
4V97|1|BA|G|2056
4V97|1|BA|A|2057
*
4V97|1|BA|U|2611
4V97|1|BA|C|2612
4V97|1|BA|U|2613
4V97|1|BA|A|2614
4V97|1|BA|U|2615

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B5
50S RIBOSOMAL PROTEIN L32
Chain BE
50S RIBOSOMAL PROTEIN L3
Chain BW
50S RIBOSOMAL PROTEIN L22

Coloring options:


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