IL_4V97_165

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UUUCC*GGUAG

Length

10 nucleotides

Bulged bases (A, C, G, U)

2689U, 2690C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_165 not in the Motif Atlas

Homologous match to IL_7RQB_105

Geometric discrepancy: 0.086

The information below is about IL_7RQB_105

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_08296.3

Basepair signature

cWW-L-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

4V97|1|BA|U|2687
4V97|1|BA|U|2688
4V97|1|BA|U|2689
4V97|1|BA|C|2690
4V97|1|BA|C|2691
*
4V97|1|BA|G|2718
4V97|1|BA|G|2719
4V97|1|BA|U|2720
4V97|1|BA|A|2721
4V97|1|BA|G|2722

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BE

50S RIBOSOMAL PROTEIN L3

Chain BR

50S RIBOSOMAL PROTEIN L17

Chain BT

50S RIBOSOMAL PROTEIN L19