IL_4V97_358

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GGGG*CUU

Length

7 nucleotides

Bulged bases

4V97|1|AA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_358 not in the Motif Atlas

Geometric match to IL_4P3T_005

Geometric discrepancy: 0.1574

The information below is about IL_4P3T_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

4V97|1|AA|G|925
4V97|1|AA|G|926
4V97|1|AA|G|927
4V97|1|AA|G|928
*
4V97|1|AA|C|1389
4V97|1|AA|U|1390
4V97|1|AA|U|1391

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AX

mRNA