IL_4V97_373

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

4V97|1|BA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_373 not in the Motif Atlas

Geometric match to IL_4LFB_031

Geometric discrepancy: 0.3522

The information below is about IL_4LFB_031

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_95727.1

Basepair signature

cWW-L-tSH-L-tHW-tHS-R-cWW-L

Number of instances in this motif group

1

Unit IDs

4V97|1|BA|C|2129
4V97|1|BA|U|2130
4V97|1|BA|G|2131
4V97|1|BA|U|2132
4V97|1|BA|G|2133
4V97|1|BA|A|2134
4V97|1|BA|A|2135
4V97|1|BA|C|2136
4V97|1|BA|C|2137
*
4V97|1|BA|G|2154
4V97|1|BA|G|2155
4V97|1|BA|G|2156
4V97|1|BA|G|2157
4V97|1|BA|A|2158
4V97|1|BA|G|2159

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BC

50S RIBOSOMAL PROTEIN L1