3D structure

PDB id
4V97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G299A.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
CCUCU*AUG
Length
8 nucleotides
Bulged bases
4V97|1|BA|U|2726
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V97_392 not in the Motif Atlas
Homologous match to IL_9DFE_103
Geometric discrepancy: 0.0953
The information below is about IL_9DFE_103
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_63596.11
Basepair signature
cWW-cWS-cSH-tWH-cWW-L
Number of instances in this motif group
19

Unit IDs

4V97|1|BA|C|2680
4V97|1|BA|C|2681
4V97|1|BA|U|2682
4V97|1|BA|C|2683
4V97|1|BA|U|2684
*
4V97|1|BA|A|2725
4V97|1|BA|U|2726
4V97|1|BA|G|2727

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BE
50S RIBOSOMAL PROTEIN L3
Chain BO
50S RIBOSOMAL PROTEIN L14
Chain BR
50S RIBOSOMAL PROTEIN L17
Chain BT
50S RIBOSOMAL PROTEIN L19

Coloring options:


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