IL_4V9A_079

3D structure

PDB id

4V9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tetracycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9A_079 not in the Motif Atlas

Geometric match to IL_7RQB_083

Geometric discrepancy: 0.3088

The information below is about IL_7RQB_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

4V9A|1|BA|C|378
4V9A|1|BA|G|379
4V9A|1|BA|U|380
*
4V9A|1|BA|A|394
4V9A|1|BA|U|395
4V9A|1|BA|G|396

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BZ

50S ribosomal protein L28