IL_4V9A_118

3D structure

PDB id

4V9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tetracycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUC*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UUC,GAA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9A_118 not in the Motif Atlas

Homologous match to IL_4WF9_053

Geometric discrepancy: 0.2702

The information below is about IL_4WF9_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9A|1|BA|U|1405
4V9A|1|BA|U|1406
4V9A|1|BA|C|1407
*
4V9A|1|BA|G|1595
4V9A|1|BA|A|1596
4V9A|1|BA|A|1597

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23