IL_4V9A_336

3D structure

PDB id

4V9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tetracycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUGUGAACCCC*GGGGGGAGG

Length

20 nucleotides

Bulged bases

4V9A|1|DA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9A|1|DA|C|2129
4V9A|1|DA|U|2130
4V9A|1|DA|G|2131
4V9A|1|DA|U|2132
4V9A|1|DA|G|2133
4V9A|1|DA|A|2134
4V9A|1|DA|A|2135
4V9A|1|DA|C|2136
4V9A|1|DA|C|2137
4V9A|1|DA|C|2138
4V9A|1|DA|C|2139
*
4V9A|1|DA|G|2152
4V9A|1|DA|G|2153
4V9A|1|DA|G|2154
4V9A|1|DA|G|2155
4V9A|1|DA|G|2156
4V9A|1|DA|G|2157
4V9A|1|DA|A|2158
4V9A|1|DA|G|2159
4V9A|1|DA|G|2160

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA