IL_4V9C_063

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAAGUUUU*AGAAUGUGCCUUCGGGAAC

Length

27 nucleotides

Bulged bases

4V9C|1|AA|U|1030, 4V9C|1|AA|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|AA|G|1003
4V9C|1|AA|A|1004
4V9C|1|AA|A|1005
4V9C|1|AA|G|1006
4V9C|1|AA|U|1007
4V9C|1|AA|U|1008
4V9C|1|AA|U|1009
4V9C|1|AA|U|1010
*
4V9C|1|AA|A|1019
4V9C|1|AA|G|1020
4V9C|1|AA|A|1021
4V9C|1|AA|A|1022
4V9C|1|AA|U|1023
4V9C|1|AA|G|1024
4V9C|1|AA|U|1025
4V9C|1|AA|G|1026
4V9C|1|AA|C|1027
4V9C|1|AA|C|1028
4V9C|1|AA|U|1029
4V9C|1|AA|U|1030
4V9C|1|AA|C|1031
4V9C|1|AA|G|1032
4V9C|1|AA|G|1033
4V9C|1|AA|G|1034
4V9C|1|AA|A|1035
4V9C|1|AA|A|1036
4V9C|1|AA|C|1037

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14

Chain CG

30S ribosomal protein S7

Chain DA

Large subunit ribosomal RNA; LSU rRNA